SRX022743
GSM561053: AGO2 S2 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AGO2

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2 cells
cell line
S2 cell line
chip antibody
anti-AGO2 mAb 9D6

Sequenced DNA Library

library_name
GSM561053: AGO2_S2_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
10289917
Reads aligned (%)
92.5
Duplicates removed (%)
9.3
Number of peaks
5169 (qval < 1E-05)

dm3

Number of total reads
10289917
Reads aligned (%)
92.7
Duplicates removed (%)
6.9
Number of peaks
6378 (qval < 1E-05)

Base call quality data from DBCLS SRA